Actinomyces sp001278845
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__Actinomyces sp001278845
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__Actinomyces sp. oral taxon 414
NCBI Strain Identifiers F0588
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.53%
CheckM Contamination 1.66%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 3,836,419 bp
Longest Contig 3,836,419 bp
Scaffold Count 1
N50 Scaffolds 3,836,419 bp
Longest Scaffold 3,836,419 bp
Genome Size 3,836,419 bp
Protein Count 3,106
Coding Density 84.34%
GC Percentage 71.94%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM127884v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04009745
Country USA: Boston; MA
Date 2015-9-4
Genbank Assembly Accession GCA_001278845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source curette
Latitude Longitude 42.36 N 71.05 W
Molecule Count 1
CDS Count 3,041
Refseq Category na
Seq Rel Date 2015/09/04
Spanned Gaps 0
Species Taxid 712122
SSU Count 3
Submitter The Forsyth Institute
Taxid 712122
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None