Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Senftenberg
NCBI Strain Identifiers 50265
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 4
23S Count 1
tRNA Count 19
Contig Count 73
N50 Contigs 236,426 bp
Longest Contig 525,263 bp
Scaffold Count 73
N50 Scaffolds 236,426 bp
Longest Scaffold 525,263 bp
Genome Size 5,194,821 bp
Protein Count 4,958
Coding Density 86.97%
GC Percentage 51.67%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM127677v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03339656
Country None
Date 2015-8-31
Genbank Assembly Accession GCA_001276775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,226
Refseq Category na
Seq Rel Date 2015/08/31
Spanned Gaps 0
Species Taxid 28901
SSU Count 4
Submitter U.S. Food and Drug Administration
Taxid 28150
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZTP00000000.1