Stenotrophomonas maltophilia_P
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia_P
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers B4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900113425.1)
Genome Characteristics
CheckM Completeness 99.89%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 17
Contig Count 180
N50 Contigs 44,228 bp
Longest Contig 152,262 bp
Scaffold Count 180
N50 Scaffolds 44,228 bp
Longest Scaffold 152,262 bp
Genome Size 4,334,733 bp
Protein Count 3,991
Coding Density 90.34%
GC Percentage 66.65%
Ambiguous Bases N/A
GTDB representative GCA_900113425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM127635v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03753636
Country Australia: Brisbane
Date 2015-8-31
Genbank Assembly Accession GCA_001276355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source lungs of cystic fibrosis patient B
Latitude Longitude 27.4667 S 153.0333 E
Molecule Count N/A
CDS Count 3,977
Refseq Category na
Seq Rel Date 2015/08/31
Spanned Gaps 0
Species Taxid 40324
SSU Count 1
Submitter University of Queensland
Taxid 40324
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDVR00000000.1