Stenotrophomonas maltophilia_AK
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia_AK
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers B1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002799215.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 100.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 214
N50 Contigs 37,885 bp
Longest Contig 232,203 bp
Scaffold Count 214
N50 Scaffolds 37,885 bp
Longest Scaffold 232,203 bp
Genome Size 4,374,130 bp
Protein Count 3,984
Coding Density 89.18%
GC Percentage 66.68%
Ambiguous Bases N/A
GTDB representative GCA_002799215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM127634v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03753635
Country Australia: Brisbane
Date 2015-8-31
Genbank Assembly Accession GCA_001276345.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source lungs of cystic fibrosis patient B
Latitude Longitude 27.4667 S 153.0333 E
Molecule Count N/A
CDS Count 3,990
Refseq Category na
Seq Rel Date 2015/08/31
Spanned Gaps 0
Species Taxid 40324
SSU Count 1
Submitter University of Queensland
Taxid 40324
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDVQ00000000.1