Stenotrophomonas maltophilia_F
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia_F
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers A2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000284595.1)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.39%
CheckM Strain Heterogeneity 20.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 242
N50 Contigs 30,789 bp
Longest Contig 140,667 bp
Scaffold Count 242
N50 Scaffolds 30,789 bp
Longest Scaffold 140,667 bp
Genome Size 4,514,746 bp
Protein Count 4,119
Coding Density 89.29%
GC Percentage 66.94%
Ambiguous Bases N/A
GTDB representative GCA_000284595.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM127630v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03753634
Country Australia: Brisbane
Date 2015-8-31
Genbank Assembly Accession GCA_001276305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source lungs of cystic fibrosis patient A
Latitude Longitude 27.4667 S 153.0333 E
Molecule Count N/A
CDS Count 4,126
Refseq Category na
Seq Rel Date 2015/08/31
Spanned Gaps 0
Species Taxid 40324
SSU Count 1
Submitter University of Queensland
Taxid 40324
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDVP00000000.1