Stenotrophomonas maltophilia
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers ISMMS4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900186865.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 3
N50 Contigs 4,734,405 bp
Longest Contig 4,734,405 bp
Scaffold Count 3
N50 Scaffolds 4,734,405 bp
Longest Scaffold 4,734,405 bp
Genome Size 4,752,108 bp
Protein Count 4,336
Coding Density 88.79%
GC Percentage 66.20%
Ambiguous Bases N/A
GTDB representative GCA_900186865.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ISMMS4v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03389651
Country USA: New York; NY
Date 2015-8-26
Genbank Assembly Accession GCA_001275085.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude 40.7898553 N 73.9531696 W
Molecule Count N/A
CDS Count 4,350
Refseq Category na
Seq Rel Date 2015/08/26
Spanned Gaps 0
Species Taxid 40324
SSU Count 4
Submitter Icahn School of Medicine at Mount Sinai
Taxid 40324
Total Gap Length 0
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JZIU00000000.1