Paenibacillus_C sp001682865
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Paenibacillales; f__Paenibacillaceae; g__Paenibacillus_C; s__Paenibacillus_C sp001682865
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Paenibacillaceae; g__Paenibacillus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Paenibacillaceae; g__Paenibacillus; s__Paenibacillus sp. FJAT-27812
NCBI Strain Identifiers FJAT-27812
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001682865.1)
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.9%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 5
23S Count 1
tRNA Count 20
Contig Count 51
N50 Contigs 398,427 bp
Longest Contig 1,161,925 bp
Scaffold Count 5
N50 Scaffolds 7,362,210 bp
Longest Scaffold 7,362,210 bp
Genome Size 7,373,184 bp
Protein Count 6,405
Coding Density 86.39%
GC Percentage 48.11%
Ambiguous Bases 296
GTDB representative GCA_001682865.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM127390v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03853468
Country China: Tibet
Date 2015-8-25
Genbank Assembly Accession GCA_001273905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 6,322
Refseq Category na
Seq Rel Date 2015/08/25
Spanned Gaps 46
Species Taxid 1684143
SSU Count 0
Submitter Fujian Academy of Agricultural Sciences
Taxid 1684143
Total Gap Length 160981
Translation Table 11
tRNA Count (total) 80
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LIGH00000000.1