Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers ST8
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 44
N50 Contigs 124,911 bp
Longest Contig 299,457 bp
Scaffold Count 31
N50 Scaffolds 163,024 bp
Longest Scaffold 324,874 bp
Genome Size 2,734,587 bp
Protein Count 2,531
Coding Density 84.14%
GC Percentage 32.64%
Ambiguous Bases 18
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM127070v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03938521
Country Australia: Brisbane
Date 2015-8-19
Genbank Assembly Accession GCA_001270705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nasopharynx sample from patient HS-CRS-17
Latitude Longitude 27.4667 S 153.0333 E
Molecule Count N/A
CDS Count 2,802
Refseq Category na
Seq Rel Date 2015/08/19
Spanned Gaps 13
Species Taxid 1280
SSU Count 1
Submitter The University of Queensland
Taxid 1280
Total Gap Length 711
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LGVN00000000.1