Streptomyces decoyicus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces decoyicus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces decoyicus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces decoyicus
NCBI Strain Identifiers NRRL 2666
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.71%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 304
N50 Contigs 75,047 bp
Longest Contig 444,093 bp
Scaffold Count 304
N50 Scaffolds 75,047 bp
Longest Scaffold 444,093 bp
Genome Size 8,586,029 bp
Protein Count 7,734
Coding Density 85.05%
GC Percentage 70.97%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM127057v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02900588
Country USA: California: Verdings City
Date 2015-8-19
Genbank Assembly Accession GCA_001270575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source garden soil
Latitude Longitude None
Molecule Count 0
Protein Count 7,714
Refseq Category na
Seq Rel Date 2015/08/19
Spanned Gaps 0
Species Taxid 249567
SSU Count 3
Submitter University of Illinois at Urbana-Champaign
Taxid 249567
Total Gap Length 0
Translation Table 11
tRNA Count (total) 66
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LGUU00000000.1