Streptomyces viridochromogenes_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces viridochromogenes_A
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces viridochromogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces viridochromogenes
NCBI Strain Identifiers NRRL 3416
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001270495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 4
tRNA Count 20
Contig Count 307
N50 Contigs 99,945 bp
Longest Contig 387,091 bp
Scaffold Count 307
N50 Scaffolds 99,945 bp
Longest Scaffold 387,091 bp
Genome Size 10,281,308 bp
Protein Count 9,229
Coding Density 87.86%
GC Percentage 70.42%
Ambiguous Bases 2
GTDB representative GCA_001270495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name P006IDBA
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02900583
Country None
Date 2015-08-19
Genbank Assembly Accession GCA_001270485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 9,241
Refseq Category na
Seq Rel Date 2015/08/19
Spanned Gaps 0
Species Taxid 1938
SSU Count 1
Submitter University of Illinois at Urbana-Champaign
Taxid 1938
Total Gap Length 0
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LGUQ00000000.1