Herbaspirillum hiltneri
Isolate MQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Herbaspirillum; s__Herbaspirillum hiltneri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Oxalobacteraceae; g__Herbaspirillum; s__Herbaspirillum hiltneri
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Oxalobacteraceae; g__Herbaspirillum; s__Herbaspirillum hiltneri; x__Herbaspirillum hiltneri N3
NCBI Strain Identifiers N3
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 96.55%
CheckM Contamination 9.2%
CheckM Strain Heterogeneity 100.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 4,965,474 bp
Longest Contig 4,965,474 bp
Scaffold Count 1
N50 Scaffolds 4,965,474 bp
Longest Scaffold 4,965,474 bp
Genome Size 4,965,474 bp
Protein Count 4,442
Coding Density 88.30%
GC Percentage 60.76%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM126792v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03010392
Country Germany: Oberpfalz; Neumarkt
Date 2015-8-17
Genbank Assembly Accession GCA_001267925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source surface-sterilized wheat roots
Latitude Longitude None
Molecule Count 1
CDS Count 4,484
Refseq Category representative genome
Seq Rel Date 2015/08/17
Spanned Gaps 0
Species Taxid 341045
SSU Count 2
Submitter Universidade Federal do Parana
Taxid 1262470
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None