Oblitimonas alkaliphila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Oblitimonas; s__Oblitimonas alkaliphila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Oblitimonas; s__Oblitimonas alkaliphila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Oblitimonas; s__Oblitimonas alkaliphila
NCBI Strain Identifiers B4199
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (8 genomes in species cluster)
Genome Characteristics
CheckM Completeness 96.59%
CheckM Contamination 0.74%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 1
N50 Contigs 2,494,031 bp
Longest Contig 2,494,031 bp
Scaffold Count 1
N50 Scaffolds 2,494,031 bp
Longest Scaffold 2,494,031 bp
Genome Size 2,494,031 bp
Protein Count 2,366
Coding Density 89.26%
GC Percentage 47.36%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM126717v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03946311
Country USA: Colorado
Date 2015-8-13
Genbank Assembly Accession GCA_001267175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Deep Liver
Latitude Longitude None
Molecule Count 1
CDS Count 2,355
Refseq Category representative genome
Seq Rel Date 2015/08/13
Spanned Gaps 0
Species Taxid 1697053
SSU Count 5
Submitter CDC
Taxid 1697053
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None