Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers FL379
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 1.2%
CheckM Strain Heterogeneity 33.33
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 69
N50 Contigs 144,869 bp
Longest Contig 315,622 bp
Scaffold Count 67
N50 Scaffolds 151,100 bp
Longest Scaffold 315,622 bp
Genome Size 2,851,821 bp
Protein Count 2,689
Coding Density 83.94%
GC Percentage 32.61%
Ambiguous Bases 15
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 9235_1#4
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1710096
Country USA: New York; Riverdale
Date 2015-7-20
Genbank Assembly Accession GCA_001262215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nasal
Latitude Longitude None
Molecule Count N/A
CDS Count 2,974
Refseq Category na
Seq Rel Date 2015/07/20
Spanned Gaps 2
Species Taxid 1280
SSU Count 4
Submitter SC
Taxid 1280
Total Gap Length 76
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CSCD00000000.1