Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio coralliirubri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio sp. J2-26
NCBI Strain Identifiers J2-26
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002156455.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.69%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 74
N50 Contigs 285,866 bp
Longest Contig 870,598 bp
Scaffold Count 71
N50 Scaffolds 285,866 bp
Longest Scaffold 870,598 bp
Genome Size 5,417,908 bp
Protein Count 4,733
Coding Density 85.94%
GC Percentage 44.49%
Ambiguous Bases N/A
GTDB representative GCA_002156455.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name VRSK26v1_PRJEB5895
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2594003
Country None
Date 2015-7-21
Genbank Assembly Accession GCA_001262155.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,713
Refseq Category na
Seq Rel Date 2015/07/21
Spanned Gaps 3
Species Taxid 1507978
SSU Count 1
Submitter STATION BIOLOGIQUE DE ROSCOFF
Taxid 1507978
Total Gap Length 300
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CCKI00000000.1