Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
NCBI Strain Identifiers A383
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001471585.2)
Genome Characteristics
CheckM Completeness 96.42%
CheckM Contamination 0.03%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 494
N50 Contigs 13,075 bp
Longest Contig 60,010 bp
Scaffold Count 57
N50 Scaffolds 246,585 bp
Longest Scaffold 738,983 bp
Genome Size 3,991,423 bp
Protein Count 3,502
Coding Density 84.68%
GC Percentage 47.50%
Ambiguous Bases 28
GTDB representative GCA_001471585.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4056_2#11
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA889233
Country Bangladesh
Date 2015-7-25
Genbank Assembly Accession GCA_001257975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,689
Refseq Category na
Seq Rel Date 2015/07/25
Spanned Gaps 437
Species Taxid 666
SSU Count 1
Submitter SC
Taxid 666
Total Gap Length 29027
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CWNP00000000.1