Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes; x__Listeria monocytogenes CFSAN002349
NCBI Strain Identifiers CFSAN002349
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.18%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 39
N50 Contigs 300,718 bp
Longest Contig 1,212,650 bp
Scaffold Count 39
N50 Scaffolds 300,718 bp
Longest Scaffold 1,212,650 bp
Genome Size 2,905,183 bp
Protein Count 2,939
Coding Density 89.78%
GC Percentage 37.86%
Ambiguous Bases N/A
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CFSAN002349_01.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN01939119
Country USA:CA
Date 2015-8-6
Genbank Assembly Accession GCA_001257675.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Spinach
Latitude Longitude None
Molecule Count N/A
CDS Count 2,896
Refseq Category na
Seq Rel Date 2015/08/06
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter FDA
Taxid 1299895
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LHRX00000000.1