Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers CFSAN023465
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 42
N50 Contigs 399,986 bp
Longest Contig 1,223,666 bp
Scaffold Count 42
N50 Scaffolds 399,986 bp
Longest Scaffold 1,223,666 bp
Genome Size 2,920,130 bp
Protein Count 2,869
Coding Density 89.90%
GC Percentage 37.93%
Ambiguous Bases N/A
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name CFSAN023465_01.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03002785
Country USA:CA
Date 2015-8-6
Genbank Assembly Accession GCA_001257575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source peaches
Latitude Longitude None
Molecule Count N/A
CDS Count 2,912
Refseq Category na
Seq Rel Date 2015/08/06
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter FDA/CFSAN
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LHSF00000000.1