Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
NCBI Strain Identifiers GP160
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001471585.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.03%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 54
N50 Contigs 355,388 bp
Longest Contig 770,851 bp
Scaffold Count 52
N50 Scaffolds 355,388 bp
Longest Scaffold 775,618 bp
Genome Size 3,986,399 bp
Protein Count 3,541
Coding Density 87.50%
GC Percentage 47.50%
Ambiguous Bases 4
GTDB representative GCA_001471585.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 5174_7#2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA889331
Country India
Date 2015-7-25
Genbank Assembly Accession GCA_001254435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source NA
Latitude Longitude None
Molecule Count N/A
CDS Count 3,720
Refseq Category na
Seq Rel Date 2015/07/25
Spanned Gaps 2
Species Taxid 666
SSU Count 1
Submitter SC
Taxid 666
Total Gap Length 22
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CWSB00000000.1