Phaeobacter italicus
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Phaeobacter; s__Phaeobacter italicus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Phaeobacter; s__Phaeobacter italicus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Phaeobacter; s__Phaeobacter italicus
NCBI Strain Identifiers CECT 7321
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001258055.1)
Genome Characteristics
CheckM Completeness 99.77%
CheckM Contamination 0.06%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 46
N50 Contigs 242,576 bp
Longest Contig 624,169 bp
Scaffold Count 46
N50 Scaffolds 242,576 bp
Longest Scaffold 624,169 bp
Genome Size 4,055,188 bp
Protein Count 3,852
Coding Density 89.41%
GC Percentage 59.93%
Ambiguous Bases N/A
GTDB representative GCA_001258055.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name N.italicaCECT7321_Prokka
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3393042
Country None
Date 2015-07-25
Genbank Assembly Accession GCA_001251095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sea water
Latitude Longitude None
Molecule Count N/A
CDS Count 3,783
Refseq Category na
Seq Rel Date 2015/07/25
Spanned Gaps 0
Species Taxid 481446
SSU Count 1
Submitter UVEG
Taxid 481446
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CVRL00000000.1