Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
NCBI Strain Identifiers MBN17
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001471585.2)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.03%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 281
N50 Contigs 26,265 bp
Longest Contig 83,755 bp
Scaffold Count 64
N50 Scaffolds 235,912 bp
Longest Scaffold 536,100 bp
Genome Size 4,019,692 bp
Protein Count 3,570
Coding Density 87.48%
GC Percentage 47.49%
Ambiguous Bases 25
GTDB representative GCA_001471585.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4056_2#2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA889362
Country India
Date 2015-07-25
Genbank Assembly Accession GCA_001250795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,732
Refseq Category na
Seq Rel Date 2015/07/25
Spanned Gaps 217
Species Taxid 666
SSU Count 1
Submitter SC
Taxid 666
Total Gap Length 9342
Translation Table 11
tRNA Count (total) 76
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CWNW00000000.1