Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio cholerae
NCBI Strain Identifiers A32
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001471585.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.03%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 51
N50 Contigs 343,602 bp
Longest Contig 492,945 bp
Scaffold Count 50
N50 Scaffolds 398,771 bp
Longest Scaffold 737,211 bp
Genome Size 4,002,262 bp
Protein Count 3,561
Coding Density 87.61%
GC Percentage 47.44%
Ambiguous Bases 11
GTDB representative GCA_001471585.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 5174_8#3
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA889159
Country Peru
Date 2015-7-25
Genbank Assembly Accession GCA_001250455.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,743
Refseq Category na
Seq Rel Date 2015/07/25
Spanned Gaps 1
Species Taxid 666
SSU Count 1
Submitter SC
Taxid 666
Total Gap Length 129
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CWNM00000000.1