Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia flexneri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia coli; x__Escherichia coli AD30
NCBI Strain Identifiers chicken
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002950215.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 117
N50 Contigs 176,113 bp
Longest Contig 541,073 bp
Scaffold Count 117
N50 Scaffolds 176,113 bp
Longest Scaffold 541,073 bp
Genome Size 5,077,949 bp
Protein Count 4,845
Coding Density 87.58%
GC Percentage 50.66%
Ambiguous Bases N/A
GTDB representative GCA_002950215.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 1.ECAD30.1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3470424
Country None
Date 2015-7-25
Genbank Assembly Accession GCA_001244915.1
Genome Category Isolate
Genome Representation full
Isolate chicken
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,230
Refseq Category na
Seq Rel Date 2015/07/25
Spanned Gaps 0
Species Taxid 562
SSU Count 1
Submitter Laboratory of Evolutionary Bioinformatics, SNU
Taxid 1169664
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CWHW00000000.1