Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia pestis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia pseudotuberculosis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; x__Yersinia pseudotuberculosis complex; s__Yersinia pseudotuberculosis
NCBI Strain Identifiers Y716
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900460465.1)
Genome Characteristics
CheckM Completeness 99.87%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 51
N50 Contigs 191,330 bp
Longest Contig 466,392 bp
Scaffold Count 51
N50 Scaffolds 191,330 bp
Longest Scaffold 466,392 bp
Genome Size 4,385,299 bp
Protein Count 3,873
Coding Density 83.74%
GC Percentage 47.50%
Ambiguous Bases 1
GTDB representative GCA_900460465.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 5139_1#7
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA859939
Country None
Date 2015-07-25
Genbank Assembly Accession GCA_001244655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,029
Refseq Category na
Seq Rel Date 2015/07/25
Spanned Gaps 0
Species Taxid 633
SSU Count 1
Submitter SC
Taxid 633
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CWJJ00000000.1