Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Liverpool
NCBI Strain Identifiers CVM N46814
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 44
N50 Contigs 369,146 bp
Longest Contig 890,408 bp
Scaffold Count 44
N50 Scaffolds 369,146 bp
Longest Scaffold 890,408 bp
Genome Size 4,750,535 bp
Protein Count 4,419
Coding Density 87.82%
GC Percentage 52.24%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Salmonella enterica CVM N46814 v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03894194
Country USA: CA
Date 2015-8-5
Genbank Assembly Accession GCA_001242905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Pork Chops
Latitude Longitude None
Molecule Count N/A
CDS Count 4,691
Refseq Category na
Seq Rel Date 2015/08/05
Spanned Gaps 0
Species Taxid 28901
SSU Count 3
Submitter FDA
Taxid 216804
Total Gap Length 0
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LHHW00000000.1