Campylobacter_D jejuni
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
NCBI Strain Identifiers OXC6613
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.53%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 23
N50 Contigs 159,858 bp
Longest Contig 516,610 bp
Scaffold Count 23
N50 Scaffolds 159,858 bp
Longest Scaffold 516,610 bp
Genome Size 1,726,021 bp
Protein Count 1,800
Coding Density 94.16%
GC Percentage 30.36%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 7213_3#69
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1401387
Country United Kingdom
Date 2015-8-3
Genbank Assembly Accession GCA_001236165.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source faeces
Latitude Longitude None
Molecule Count N/A
CDS Count 1,790
Refseq Category na
Seq Rel Date 2015/08/03
Spanned Gaps 0
Species Taxid 197
SSU Count 1
Submitter SC
Taxid 197
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CUUY00000000.1