Staphylococcus aureus
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers DEU5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 71
N50 Contigs 88,486 bp
Longest Contig 212,064 bp
Scaffold Count 71
N50 Scaffolds 88,486 bp
Longest Scaffold 212,064 bp
Genome Size 2,868,864 bp
Protein Count 2,725
Coding Density 84.33%
GC Percentage 32.68%
Ambiguous Bases 4
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 5364_1#5
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA862580
Country Turkey:Izmir
Date 2015-8-3
Genbank Assembly Accession GCA_001229425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Catheter
Latitude Longitude None
Molecule Count N/A
CDS Count 2,982
Refseq Category na
Seq Rel Date 2015/08/03
Spanned Gaps 0
Species Taxid 1280
SSU Count 1
Submitter SC
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CTYO00000000.1