Staphylococcus aureus
Isolate HQ 16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers IU12
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 76
N50 Contigs 83,287 bp
Longest Contig 205,195 bp
Scaffold Count 75
N50 Scaffolds 83,287 bp
Longest Scaffold 205,195 bp
Genome Size 2,867,081 bp
Protein Count 2,728
Coding Density 84.28%
GC Percentage 32.68%
Ambiguous Bases 1
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 5083_7#11
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA862658
Country Turkey:Istanbul
Date 2015-8-3
Genbank Assembly Accession GCA_001226925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Abscess
Latitude Longitude None
Molecule Count N/A
CDS Count 2,986
Refseq Category na
Seq Rel Date 2015/08/03
Spanned Gaps 1
Species Taxid 1280
SSU Count 1
Submitter SC
Taxid 1280
Total Gap Length 37
Translation Table 11
tRNA Count (total) 25
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CTWD00000000.1