Staphylococcus aureus
Isolate HQ 16S/23S 10 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers LIT68
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 10
Contig Count 84
N50 Contigs 58,621 bp
Longest Contig 219,837 bp
Scaffold Count 84
N50 Scaffolds 58,621 bp
Longest Scaffold 219,837 bp
Genome Size 2,882,279 bp
Protein Count 2,749
Coding Density 84.37%
GC Percentage 32.68%
Ambiguous Bases 10
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 5197_1#8
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA862586
Country Lithuania
Date 2015-8-3
Genbank Assembly Accession GCA_001226905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source wound
Latitude Longitude None
Molecule Count N/A
CDS Count 3,039
Refseq Category na
Seq Rel Date 2015/08/03
Spanned Gaps 0
Species Taxid 1280
SSU Count 1
Submitter SC
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 17
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CTYC00000000.1