Campylobacter_D jejuni
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
NCBI Strain Identifiers OXC6329
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 17
N50 Contigs 169,551 bp
Longest Contig 356,540 bp
Scaffold Count 15
N50 Scaffolds 227,899 bp
Longest Scaffold 526,107 bp
Genome Size 1,694,982 bp
Protein Count 1,755
Coding Density 93.96%
GC Percentage 30.36%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 7038_3#79
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1010640
Country United Kingdom
Date 2015-8-3
Genbank Assembly Accession GCA_001224125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source faeces
Latitude Longitude None
Molecule Count N/A
CDS Count 1,744
Refseq Category na
Seq Rel Date 2015/08/03
Spanned Gaps 2
Species Taxid 197
SSU Count 1
Submitter SC
Taxid 197
Total Gap Length 29
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CUKN00000000.1