Yersinia enterocolitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers YE08/03;YE08;03
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 146
N50 Contigs 67,724 bp
Longest Contig 245,982 bp
Scaffold Count 129
N50 Scaffolds 80,010 bp
Longest Scaffold 245,982 bp
Genome Size 4,445,087 bp
Protein Count 4,036
Coding Density 85.65%
GC Percentage 46.97%
Ambiguous Bases 16
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4976_1#8
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA980160
Country United Kingdom
Date 2015-7-21
Genbank Assembly Accession GCA_001219785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source faeces
Latitude Longitude None
Molecule Count N/A
CDS Count 4,086
Refseq Category na
Seq Rel Date 2015/07/21
Spanned Gaps 17
Species Taxid 630
SSU Count 1
Submitter SC
Taxid 630
Total Gap Length 1032
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CTJC00000000.1