Yersinia enterocolitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers 03;YE13/03;YE13
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 78
N50 Contigs 149,471 bp
Longest Contig 301,376 bp
Scaffold Count 61
N50 Scaffolds 215,850 bp
Longest Scaffold 361,433 bp
Genome Size 4,636,042 bp
Protein Count 4,187
Coding Density 86.67%
GC Percentage 47.16%
Ambiguous Bases 16
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4976_2#8
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA980154
Country United Kingdom
Date 2015-7-21
Genbank Assembly Accession GCA_001219625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source faeces
Latitude Longitude None
Molecule Count N/A
CDS Count 4,235
Refseq Category na
Seq Rel Date 2015/07/21
Spanned Gaps 17
Species Taxid 630
SSU Count 1
Submitter SC
Taxid 630
Total Gap Length 915
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CTIU00000000.1