Yersinia enterocolitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers 02;YE227;YE227/02
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 41
N50 Contigs 271,197 bp
Longest Contig 597,803 bp
Scaffold Count 39
N50 Scaffolds 271,197 bp
Longest Scaffold 597,803 bp
Genome Size 4,645,601 bp
Protein Count 4,192
Coding Density 86.62%
GC Percentage 47.17%
Ambiguous Bases 10
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4976_1#9
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA980142
Country United Kingdom
Date 2015-7-21
Genbank Assembly Accession GCA_001218705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,262
Refseq Category na
Seq Rel Date 2015/07/21
Spanned Gaps 2
Species Taxid 630
SSU Count 1
Submitter SC
Taxid 630
Total Gap Length 60
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CTJE00000000.1