Yersinia enterocolitica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers 02;YE204/02;YE204
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 116
N50 Contigs 86,830 bp
Longest Contig 234,990 bp
Scaffold Count 113
N50 Scaffolds 88,603 bp
Longest Scaffold 234,990 bp
Genome Size 4,509,159 bp
Protein Count 4,093
Coding Density 85.32%
GC Percentage 46.89%
Ambiguous Bases 27
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4976_2#2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA980145
Country United Kingdom
Date 2015-7-21
Genbank Assembly Accession GCA_001218165.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,164
Refseq Category na
Seq Rel Date 2015/07/21
Spanned Gaps 3
Species Taxid 630
SSU Count 1
Submitter SC
Taxid 630
Total Gap Length 85
Translation Table 11
tRNA Count (total) 65
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CTER00000000.1