Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers USFL085
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 50
N50 Contigs 173,145 bp
Longest Contig 864,721 bp
Scaffold Count 50
N50 Scaffolds 173,145 bp
Longest Scaffold 864,721 bp
Genome Size 2,880,090 bp
Protein Count 2,711
Coding Density 83.82%
GC Percentage 32.62%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 7748_4#87
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1324569
Country USA: New York; Morrisania
Date 2015-7-20
Genbank Assembly Accession GCA_001204975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nasal
Latitude Longitude None
Molecule Count N/A
CDS Count 2,987
Refseq Category na
Seq Rel Date 2015/07/20
Spanned Gaps 0
Species Taxid 1280
SSU Count 5
Submitter SC
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CSGH00000000.1