Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers USFL242
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 29
N50 Contigs 705,943 bp
Longest Contig 895,799 bp
Scaffold Count 29
N50 Scaffolds 705,943 bp
Longest Scaffold 895,799 bp
Genome Size 2,880,471 bp
Protein Count 2,700
Coding Density 83.83%
GC Percentage 32.62%
Ambiguous Bases 1
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 7738_3#55
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1324680
Country USA: New York; Inwood
Date 2015-7-20
Genbank Assembly Accession GCA_001196415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soft tissue
Latitude Longitude None
Molecule Count N/A
CDS Count 2,989
Refseq Category na
Seq Rel Date 2015/07/20
Spanned Gaps 0
Species Taxid 1280
SSU Count 4
Submitter SC
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CSJJ00000000.1