Burkholderia mallei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia mallei
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia pseudomallei
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__pseudomallei group; s__Burkholderia pseudomallei
NCBI Strain Identifiers C31
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000011705.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 91
N50 Contigs 163,184 bp
Longest Contig 432,885 bp
Scaffold Count 72
N50 Scaffolds 222,070 bp
Longest Scaffold 596,394 bp
Genome Size 7,093,542 bp
Protein Count 5,856
Coding Density 84.11%
GC Percentage 68.22%
Ambiguous Bases 22
GTDB representative GCA_000011705.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 7907_5#31
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA807008
Country Thailand
Date 2015-7-21
Genbank Assembly Accession GCA_001196125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urine
Latitude Longitude None
Molecule Count N/A
CDS Count 7,269
Refseq Category na
Seq Rel Date 2015/07/21
Spanned Gaps 19
Species Taxid 28450
SSU Count 1
Submitter SC
Taxid 28450
Total Gap Length 766
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CSMO00000000.1