Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio harveyi
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio harveyi
NCBI Strain Identifiers KC13.17.5
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 3
23S Count 2
tRNA Count 19
Contig Count 52
N50 Contigs 356,903 bp
Longest Contig 1,316,613 bp
Scaffold Count 42
N50 Scaffolds 807,619 bp
Longest Scaffold 1,316,615 bp
Genome Size 5,795,792 bp
Protein Count 5,177
Coding Density 86.63%
GC Percentage 45.44%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM119269v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00032033
Country Viet Nam:Nghe An; Quynh Luu
Date 2015-7-31
Genbank Assembly Accession GCA_001192695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,226
Refseq Category na
Seq Rel Date 2015/07/31
Spanned Gaps 10
Species Taxid 669
SSU Count 3
Submitter Laboratory of Genome Science, Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology
Taxid 669
Total Gap Length 885
Translation Table 11
tRNA Count (total) 107
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BBXN00000000.1