Haloferax gibbonsii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Halobacteriota; c__Halobacteria; o__Halobacteriales; f__Haloferacaceae; g__Haloferax; s__Haloferax gibbonsii
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Halobacteria; o__Haloferacales; f__Haloferacaceae; g__Haloferax; s__Haloferax gibbonsii
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Stenosarchaea group; c__Halobacteria; o__Haloferacales; f__Haloferacaceae; g__Haloferax; s__Haloferax gibbonsii
NCBI Strain Identifiers ARA6
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000336775.1)
Genome Characteristics
CheckM Completeness 99.44%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 5
N50 Contigs 2,945,391 bp
Longest Contig 2,945,391 bp
Scaffold Count 5
N50 Scaffolds 2,945,391 bp
Longest Scaffold 2,945,391 bp
Genome Size 3,918,454 bp
Protein Count 3,862
Coding Density 86.80%
GC Percentage 66.20%
Ambiguous Bases N/A
GTDB representative GCA_000336775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM119096v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03755233
Country Brazil: Lagoa Vermelha
Date 2015-8-3
Genbank Assembly Accession GCA_001190965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source saline saltern
Latitude Longitude None
Molecule Count 5
CDS Count 3,774
Refseq Category na
Seq Rel Date 2015/08/03
Spanned Gaps 0
Species Taxid 35746
SSU Count 2
Submitter Universidade do Estado do Rio de Janeiro
Taxid 35746
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None