Trabulsiella odontotermitis_A
Isolate HQ 16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Trabulsiella; s__Trabulsiella odontotermitis_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Trabulsiella; s__Trabulsiella odontotermitis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Trabulsiella; s__Trabulsiella odontotermitis
NCBI Strain Identifiers 12
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001188485.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 25.0
5S Count 0
16S Count 3
23S Count 2
tRNA Count 15
Contig Count 190
N50 Contigs 79,484 bp
Longest Contig 189,137 bp
Scaffold Count 190
N50 Scaffolds 79,484 bp
Longest Scaffold 189,137 bp
Genome Size 4,816,531 bp
Protein Count 4,640
Coding Density 89.50%
GC Percentage 55.11%
Ambiguous Bases 1
GTDB representative GCA_001188485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM118849v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02836822
Country South Africa
Date 2015-7-29
Genbank Assembly Accession GCA_001188495.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source abdomen
Latitude Longitude 24.675139 S 28.797333 E
Molecule Count N/A
CDS Count 4,642
Refseq Category na
Seq Rel Date 2015/07/29
Spanned Gaps 0
Species Taxid 379893
SSU Count 4
Submitter University of Copenhagen
Taxid 379893
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNGI00000000.1