Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers CHS240
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 9
tRNA Count 20
Contig Count 18
N50 Contigs 1,013,870 bp
Longest Contig 2,075,300 bp
Scaffold Count 7
N50 Scaffolds 5,582,289 bp
Longest Scaffold 5,582,289 bp
Genome Size 5,870,348 bp
Protein Count 5,536
Coding Density 87.36%
GC Percentage 56.96%
Ambiguous Bases 4
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS240_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03280380
Country USA
Date 2015-07-22
Genbank Assembly Accession GCA_001185675.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,912
Refseq Category na
Seq Rel Date 2015/07/22
Spanned Gaps 11
Species Taxid 573
SSU Count 9
Submitter Broad Institute
Taxid 573
Total Gap Length 7252
Translation Table 11
tRNA Count (total) 89
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LGJK00000000.1