Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers E1
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 96.01%
CheckM Contamination 1.12%
CheckM Strain Heterogeneity 57.14
5S Count 6
16S Count 2
23S Count 3
tRNA Count 19
Contig Count 601
N50 Contigs 19,259 bp
Longest Contig 118,638 bp
Scaffold Count 601
N50 Scaffolds 19,259 bp
Longest Scaffold 118,638 bp
Genome Size 5,178,597 bp
Protein Count 4,859
Coding Density 86.99%
GC Percentage 45.51%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM118551v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02948018
Country Bahamas: Chub Cay
Date 2015-7-22
Genbank Assembly Accession GCA_001185515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source White grunt gut
Latitude Longitude None
Molecule Count 0
Protein Count 4,905
Refseq Category na
Seq Rel Date 2015/07/22
Spanned Gaps 0
Species Taxid 680
SSU Count 6
Submitter Naval Research Laboratory
Taxid 680
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JPTJ00000000.1