Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers 602L
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.17%
CheckM Contamination 0.72%
CheckM Strain Heterogeneity 57.14
5S Count 4
16S Count 2
23S Count 1
tRNA Count 18
Contig Count 552
N50 Contigs 19,434 bp
Longest Contig 73,718 bp
Scaffold Count 552
N50 Scaffolds 19,434 bp
Longest Scaffold 73,718 bp
Genome Size 5,485,048 bp
Protein Count 5,095
Coding Density 87.51%
GC Percentage 45.60%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM118526v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02948014
Country USA: Boca Ciega Bay; Florida
Date 2015-7-22
Genbank Assembly Accession GCA_001185265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Surface water
Latitude Longitude None
Molecule Count 0
Protein Count 5,090
Refseq Category na
Seq Rel Date 2015/07/22
Spanned Gaps 0
Species Taxid 680
SSU Count 3
Submitter Naval Research Laboratory
Taxid 680
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JPTF00000000.1