Neisseria meningitidis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
NCBI Strain Identifiers 311112
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900638555.1)
Genome Characteristics
CheckM Completeness 99.75%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 113
N50 Contigs 42,913 bp
Longest Contig 144,971 bp
Scaffold Count 78
N50 Scaffolds 64,992 bp
Longest Scaffold 182,640 bp
Genome Size 2,098,189 bp
Protein Count 1,979
Coding Density 81.91%
GC Percentage 51.71%
Ambiguous Bases N/A
GTDB representative GCA_900638555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Nm311112
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02729279
Country China: Shanghai City
Date 2015-7-20
Genbank Assembly Accession GCA_001183375.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Cerebro-Spinal Fluid
Latitude Longitude 31.22 N 121.48 E
Molecule Count N/A
CDS Count 2,387
Refseq Category na
Seq Rel Date 2015/07/20
Spanned Gaps 35
Species Taxid 487
SSU Count 1
Submitter National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention
Taxid 487
Total Gap Length 591
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMDE00000000.1