Neisseria meningitidis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
NCBI Strain Identifiers 100514
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900638555.1)
Genome Characteristics
CheckM Completeness 99.56%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 125
N50 Contigs 39,196 bp
Longest Contig 273,789 bp
Scaffold Count 99
N50 Scaffolds 43,545 bp
Longest Scaffold 273,789 bp
Genome Size 2,034,915 bp
Protein Count 1,944
Coding Density 83.85%
GC Percentage 51.78%
Ambiguous Bases N/A
GTDB representative GCA_900638555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Nm100514
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02729217
Country China: Beijing City
Date 2015-7-20
Genbank Assembly Accession GCA_001183285.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nasopharyngeal swab
Latitude Longitude 39.92 N 116.46 E
Molecule Count N/A
CDS Count 2,235
Refseq Category na
Seq Rel Date 2015/07/20
Spanned Gaps 26
Species Taxid 487
SSU Count 1
Submitter National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention
Taxid 487
Total Gap Length 380
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMDB00000000.1