Streptococcus sp001182825
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sp001182825
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sp. X13SY08
NCBI Strain Identifiers X13SY08
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 95.93%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 5
N50 Contigs 975,227 bp
Longest Contig 975,227 bp
Scaffold Count 5
N50 Scaffolds 975,227 bp
Longest Scaffold 975,227 bp
Genome Size 1,548,621 bp
Protein Count 1,886
Coding Density 86.99%
GC Percentage 40.72%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM118282v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03798557
Country China: Fuzhou
Date 2015-8-25
Genbank Assembly Accession GCA_001182825.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,577
Refseq Category na
Seq Rel Date 2015/08/25
Spanned Gaps 0
Species Taxid 1676616
SSU Count 1
Submitter Fujian Academy of Agricultural Sciences
Taxid 1676616
Total Gap Length 0
Translation Table 11
tRNA Count (total) 28
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFYO00000000.2