Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers KpVA-5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 87.5
5S Count 10
16S Count 9
23S Count 15
tRNA Count 20
Contig Count 208
N50 Contigs 120,106 bp
Longest Contig 378,504 bp
Scaffold Count 208
N50 Scaffolds 120,106 bp
Longest Scaffold 378,504 bp
Genome Size 5,739,687 bp
Protein Count 5,582
Coding Density 87.62%
GC Percentage 57.13%
Ambiguous Bases 13
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name KpVA-5
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3108421
Country None
Date 2015-7-7
Genbank Assembly Accession GCA_001182465.1
Genome Category Isolate
Genome Representation full
Isolate KpVA-5
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,877
Refseq Category na
Seq Rel Date 2015/07/07
Spanned Gaps 0
Species Taxid 573
SSU Count 17
Submitter UNIMI
Taxid 573
Total Gap Length 0
Translation Table 11
tRNA Count (total) 86
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CDFO00000000.1