Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers KpVA-2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 66.67
5S Count 10
16S Count 9
23S Count 13
tRNA Count 20
Contig Count 127
N50 Contigs 232,617 bp
Longest Contig 367,724 bp
Scaffold Count 127
N50 Scaffolds 232,617 bp
Longest Scaffold 367,724 bp
Genome Size 5,594,643 bp
Protein Count 5,353
Coding Density 87.83%
GC Percentage 57.16%
Ambiguous Bases 19
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name KpVA-2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3108418
Country None
Date 2015-7-7
Genbank Assembly Accession GCA_001182405.1
Genome Category Isolate
Genome Representation full
Isolate KpVA-2
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,633
Refseq Category na
Seq Rel Date 2015/07/07
Spanned Gaps 0
Species Taxid 573
SSU Count 16
Submitter UNIMI
Taxid 573
Total Gap Length 0
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CDFP00000000.1