Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers P1_London_28_IMP_1_04_05
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.59%
CheckM Contamination 0.43%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 312
N50 Contigs 54,919 bp
Longest Contig 211,654 bp
Scaffold Count 312
N50 Scaffolds 54,919 bp
Longest Scaffold 211,654 bp
Genome Size 7,185,412 bp
Protein Count 6,806
Coding Density 88.99%
GC Percentage 65.70%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name P1_London_28_IMP_1_04_05
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3374585
Country None
Date 2015-7-7
Genbank Assembly Accession GCA_001180345.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,985
Refseq Category na
Seq Rel Date 2015/07/07
Spanned Gaps 0
Species Taxid 287
SSU Count 1
Submitter PHE
Taxid 287
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CVUY00000000.1