Streptococcus equi
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equi
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equi
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; x__Streptococcus dysgalactiae group; s__Streptococcus equi; sb__Streptococcus equi subsp. equi
NCBI Strain Identifiers EQUI0014
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900637675.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 75
N50 Contigs 48,348 bp
Longest Contig 136,596 bp
Scaffold Count 75
N50 Scaffolds 48,348 bp
Longest Scaffold 136,596 bp
Genome Size 2,159,910 bp
Protein Count 2,087
Coding Density 85.52%
GC Percentage 41.13%
Ambiguous Bases 1
GTDB representative GCA_900637675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 6817_1#61
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1032884
Country United Kingdom
Date 2015-7-7
Genbank Assembly Accession GCA_001177105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Guttural pouch
Latitude Longitude None
Molecule Count N/A
CDS Count 2,057
Refseq Category na
Seq Rel Date 2015/07/07
Spanned Gaps 0
Species Taxid 1336
SSU Count 1
Submitter SC
Taxid 148942
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CWFK00000000.1