Streptococcus equi
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equi
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus equi
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; x__Streptococcus dysgalactiae group; s__Streptococcus equi; sb__Streptococcus equi subsp. equi
NCBI Strain Identifiers EQUI0041
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900637675.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 82
N50 Contigs 42,460 bp
Longest Contig 137,299 bp
Scaffold Count 82
N50 Scaffolds 42,460 bp
Longest Scaffold 137,299 bp
Genome Size 2,131,852 bp
Protein Count 2,042
Coding Density 85.39%
GC Percentage 41.21%
Ambiguous Bases N/A
GTDB representative GCA_900637675.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 6817_2#88
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1032792
Country United Kingdom
Date 2015-7-7
Genbank Assembly Accession GCA_001175645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nasal swab
Latitude Longitude None
Molecule Count N/A
CDS Count 2,020
Refseq Category na
Seq Rel Date 2015/07/07
Spanned Gaps 0
Species Taxid 1336
SSU Count 1
Submitter SC
Taxid 148942
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CVXY00000000.1